July 2025 goals and daily notebook entries.

Goals

Writing and manuscripts

1. Resubmit Pacuta 2022
2. Resubmit e5 deep dive
3. Check in w/ Chloe re AST histology

Sample processing

1. Library prep for ENCORE

Data analysis

1. Jacard analysis for AST 2021
2. Any e5 stuff?

Field work / travel

1. SAP application for Barott lab
2. AST spawning in late July

Daily log

20250701

• Library prep
• Zoe experiment
• Katie meeting
• Marcelina meeting

20250702

• Zoe experiment
• Emma meeting
• Hollie meeting
• SAP report
• ICRS session proposal
• Pushed all mcap stuff to aging repo

20250703

• Zoe experiment
• Barott lab meeting
• Pacuta edits

20250704

• Moving

20250705

• Moving

20250706

• Pacuta edits + redoing figs

20250707

• Zoe experiment
• Lab meeting
• Dr appt
• SAP application
• Pacuta edits
• Playing around with the PI curve data

20250708

• Katie meeting
• Smith fellowship brainstorming
• Submitted ICRS session proposal
• Therapy
• SAP application

20250708

• SAP application
• Zoe experiment

20250709

• Zoe experiment
• SAP application

20250710

• Zoe experiment
• Freezer stuff
• Barott lab meeting
• Smith app brainstorming

20250711

• Zoe experiment
• e5 meeting
• Submitted SAP app

20250712

• Zoe experiment

20250713

• Pacuta minor edits to reviewers
• e5 response to reviewers

20250714

• Zoe experiment done!!
• Submitted Pacuta response to reviewers

20250715

• Smith fellowship meeting
• Therapy
• e5 ncRNA paper responding to reviewers

20250716

• respond to reviewers e5 paper
• blast apul lncs to amil lncs
• AST jaccard mRNA-miRNA network coding

20250717

• respond to reviewers + writing for e5 paper
• Random lab things
• Code for PI curves

20250718

• e5 meeting
• Random lab things

20250719

Nothing

20250720

• Response to reviewers for e5 and edits to manuscript

20250721

• Sent out revised manuscript for e5 to co-authors for them to read by July 29
• Dive w/ Jake Warner and Zoe

20250722

• Hollie meeting
• Shayle meeting
• Worked on AST 2021 code

20250723

• Smith app writing and reading
• Read Ayers et al. 2023

20250724

• Zoe to airport :’(
• Wrote out HMW protocol